For retina flat mounts, the retinas were dissected and washed in PBS. Nonspecific binding was blocked and permeabilization was achieved with a solution of 0.25% Triton-X100 and 10% donkey serum in PBS for 1 hour at room temperature. Primary antibody to RBPMS (1:500; PhosphoSolutions, Aurora, CO, USA) was applied and incubated at 4°C for three days. Retinas were then washed with PBS. Alexa-conjugated secondary antibodies (Molecular Probes) were applied and incubated at 4°C for 1 day. Retinas were washed with PBS. Four radial incisions were made. The retinas were flat-mounted onto a microscope slide. Slides were dried overnight and coverslipped with Mowiol.
Optic nerves were embedded in optimal cutting temperature compound (Scigen, Gardena, CA). Optic nerves were sectioned on a cryostat longitudinally (10 µm) and directly mounted onto gelatin-subbed microscope slides. Every fourth section was processed for analysis. Optic nerve sections were blocked and permeabilized with 0.25% Triton-X100 and 10% donkey serum in Tris-buffered saline solution for one hour at room temperature. Primary antibodies to CTB (1:1000; List Biological Labs), mCherry (1:1000; Sicgen), glial fibrillary acidic protein (GFAP) (1:1000; EnCor Biotechnology, Gainesville, FL, USA), βIII-tubulin (1:1000; BioLegend, San Diego, CA, USA), postsynaptic density protein 95 (PSD-95) (1:1000; Abcam, Cambridge, MA, USA), vesicular glutamate transporter-2 (VGLUT2) (1:1000; MilliporeSigma), or NeuN (1:1000; EnCor Biotechnology) were applied and incubated at 4°C for one day. Alexa-conjugated secondary antibodies (Molecular Probes) were applied and incubated at room temperature for one hour. Slides were dried overnight and coverslipped with Mowiol.