For one patient (MM_0642) transfoveal OCT scans were of low image quality because of nystagmus and from a different time point (two months later); hence, a precise AOSLO foveal center could not be determined (
Supplementary Fig. S10); this patient was not included in cone metrics estimations. Cone density estimates for patients with available data are reported in
Table 1. Average (± SD) cone densities at ROIs 0.5° to the fovea, ranged from 12,620 (±750) to 23,660 (±5440) cells/mm
2, whereas intercell spacing ranged from 7.0 (±0.2) to 9.7 (±0.7) µm. Densities were highly variable between datasets and, in some cases, also varied across the respective meridians for an individual. Comparatively, average cone density and intercell distance previously reported in an unaffected eye at 150 µm eccentricity (roughly 0.5° from fovea) were 87,000 cells/mm
2 and 3 µm, respectively.
36 Overall, the densities in this
RDH12-EOSRD population were considerably lower than those reported in similar locations in an unaffected eye but do illustrate varying levels of preserved structure, regardless of age. Notably, between patches of cone mosaics, there were large-in-diameter, contoured bumps that were observed both near the fovea and at more eccentric locations (see examples of this in
Supplementary Figs. S3,
S6, and
S8). Additionally, in some cases, there were cones in the quadrant-detection image that seemed to have a stretched appearance, and this was most apparent in images for MM_0642 (see
Supplementary Fig. S10). It is possible that the appearance of stretched photoreceptors could have been due to an imaging artefact, potentially caused by depth of focus or large changes in thickness of inner retinal layers between imaging locations.
For the longitudinal data (MM_0594), cone densities assessed using 100 µm square ROIs appeared similar at baseline and six months (
Table 1). In nasal and temporal meridians, the count was numerically lower by six months, whereas the opposite was the case in the other meridians. Small variations in counts in either direction are to be expected, because the OCT-derived marker for the foveal center (and therefore the corresponding ROIs) may have fallen at slightly different locations. Additionally, possible changes in cell location and size make it more challenging to track individual cones over time, so comparisons of cone densities here may not be entirely reliable. In
Figure 2, images taken at visits six months apart were overlayed, and a larger ROI was used, allowing for a greater overlap of the sampling area at the two timepoints. These images more clearly demonstrate the potential structural changes over the short observational timeframe. For example, clusters of remnant cells appear to move location or alternatively reduce in area and become more spaced out over time.