Investigative Ophthalmology & Visual Science Cover Image for Volume 65, Issue 7
June 2024
Volume 65, Issue 7
Open Access
ARVO Annual Meeting Abstract  |   June 2024
Identifying CD36+ fibroblasts and the stromal cell population of the choroid by using a model of choroidal neovascularisation and CITE-Seq (cellular indexing of transcriptomes and epitopes) in mice
Author Affiliations & Notes
  • Alice Brandli
    Anatomy and Physiology, The University of Melbourne, Melbourne, Victoria, Australia
  • Adhithi Ramesh
    Anatomy and Physiology, The University of Melbourne, Melbourne, Victoria, Australia
  • Peter Hickey
    The Cellular Genomics Projects Team, WEHI, Victoria, Australia
    Department of Medical Biology, WEHI, Victoria, Australia
  • Casey Anttila
    The Cellular Genomics Projects Team, WEHI, Victoria, Australia
  • Danniela Zalcenstein
    The Cellular Genomics Projects Team, WEHI, Victoria, Australia
    Department of Medical Biology, WEHI, Victoria, Australia
  • Matt Rutar
    Anatomy and Physiology, The University of Melbourne, Melbourne, Victoria, Australia
    Centre of Research in Therapeutic Solutions, University of Canberra, Canberra, Australian Capital Territory, Australia
  • Erica L Fletcher
    Anatomy and Physiology, The University of Melbourne, Melbourne, Victoria, Australia
  • Footnotes
    Commercial Relationships   Alice Brandli None; Adhithi Ramesh None; Peter Hickey None; Casey Anttila None; Danniela Zalcenstein None; Matt Rutar None; Erica Fletcher CSL, Code C (Consultant/Contractor)
  • Footnotes
    Support  NHMRC
Investigative Ophthalmology & Visual Science June 2024, Vol.65, 4965. doi:
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      Alice Brandli, Adhithi Ramesh, Peter Hickey, Casey Anttila, Danniela Zalcenstein, Matt Rutar, Erica L Fletcher; Identifying CD36+ fibroblasts and the stromal cell population of the choroid by using a model of choroidal neovascularisation and CITE-Seq (cellular indexing of transcriptomes and epitopes) in mice. Invest. Ophthalmol. Vis. Sci. 2024;65(7):4965.

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      © ARVO (1962-2015); The Authors (2016-present)

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Abstract

Purpose : The choroid is a vascularised and pigmented stroma that supplies the outer retina. In late age-related macular degeneration, the choroid is the site from which aberrant blood vessel growth occurs. The aim of this study was to investigate the stromal cells, including fibroblasts, and their gene expression under normal and disease conditions using a laser model of neovascular AMD

Methods : Male mice aged 10-12 weeks (strains: C57/Bl6 and TCRd-/-) underwent laser photocoagulation (Micron III, 523 nm light, 350 mW, 70 ms) to introduce 4 lesions/eye a model of nAMD. Seven days later lasered mice (n = 6) and unlasered mice (n=6) were euthanized. Eyes were dissected and the anterior eye, lens and retina were discarded. The RPE/choroid dissociated into a single cell solution using an enzymatic dissociation per N. Cells were labelled with DAPI as live/dead marker, 10X CellPlex, TotalSeq A, an epitope label for 174 antibodies Cells were sorted on BD Aria Fusion and underwent single cell capture using the 10X Chromium 3’HT kit. Sequencing was undertaken using NextSeq 2000 (Illumina). Reads were aligned and quantified against the mm10 reference genome annotations using Cell Ranger (v7.1) with downstream analysis performed in R and Bioconductor.

Results : There were approximately 170,000 RPE/choroid live cells sorted with 24,839 biologically relevant cells captured and sequenced. Unbiased clustering using UMAP resulted in 23 clusters. The bulk of cells identified were stromal cells (46%) for clusters (5-8). Cluster 8 is proposed as fibroblasts. Cluster 8 had high gene expression for extracellular matrix genes GSN, CD34, COL3A1, IGFBP6, MFAP5, the vascular endothelial growth factor receptor (FLT1), and high epitope expression of CD36.

Conclusions : The current study revealed the bulk of choroidal cells were stomal cells. This study identified CD36 a glycoprotein receptor for thrombospondin on stomal cells. This marker, CD36, has the potential to identify pathological fibroblasts in choroidal neovascularisation.

This abstract was presented at the 2024 ARVO Annual Meeting, held in Seattle, WA, May 5-9, 2024.

 

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