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Anatomy and Pathology/Oncology August 2019

Multi-Modality Analysis Improves Survival Prediction in Enucleated Uveal Melanoma Patients

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Wojtek Drabarek; Serdar Yavuzyigitoglu; Askar Obulkasim; Job van Riet; Kyra N. Smit; Natasha M. van Poppelen; Jolanda Vaarwater; Tom Brands; Bert Eussen; Robert M. Verdijk; Nicole C. Naus; Hanneke W. Mensink; Dion Paridaens; Eric Boersma; Harmen J. G. van de Werken; Emine Kilic; Annelies de Klein; for the Rotterdam Ocular Melanoma Study Group
TAGS: copy number polymorphism, histopathology tests, intraocular melanoma, mutation, neoplasms, single nucleotide polymorphism, bap1 gene, neoplasm metastasis, sf3b1 gene, cohort studies
Invest. Ophthalmol. Vis. Sci.. 2019; 60(10):3595-3605. doi: https://doi.org/10.1167/iovs.18-24818

Includes: Supplemental Content

ARVO Annual Meeting Abstract July 2019

The effect of spliceosome inhibitor E7107 on SF3B1 mut uveal melanoma cell lines

Wojtek Drabarek; Job van Riet; Harmen van de Werken; Annelies de Klein; Emine Kilic

Invest. Ophthalmol. Vis. Sci.. 2019; 60(9):732. doi:

ARVO Annual Meeting Abstract July 2019

Prognostication of uveal melanoma patients: are exosomes the solution?

Emine Kilic; Kyra Smit; Natasha van Poppelen; Taran Lunavat; Jolanda Vaarwater; Su Chul Jang; Robert M. Verdijk; Jan Lötvall; Annelies de Klein

Invest. Ophthalmol. Vis. Sci.. 2019; 60(9):749. doi:

ARVO Annual Meeting Abstract July 2019

Retinal hemangioblastomas in von Hippel-Lindau germline mutation carriers: progression, complications and treatment outcome

Anass Hajjaj; Koen van Overdam; Rogier Oldenburg; Annelies de Klein; Emine Kilic

Invest. Ophthalmol. Vis. Sci.. 2019; 60(9):3547. doi:

ARVO Annual Meeting Abstract July 2018

Uveal Melanoma Metastatic Rate is Relative to Stochastic Mutation Rate and Type of Mutation

Eszter Szalai; Yi Jiang; Natasha M. van Poppelen; Martine J. Jager; Annelies de Klein; Emine Kilic; Hans Grossniklaus

Invest. Ophthalmol. Vis. Sci.. 2018; 59(9):3633. doi:

ARVO Annual Meeting Abstract June 2017

Molecular classification of uveal melanoma subtypes using integrative mutational and whole-genome copy number analysis

Serdar Yavuzyigitoglu; Wojtek Drabarek; Kyra N Smit; Askar Obulkasim; Natasha van Poppelen; Anna Koopmans; Jolanda Vaarwater; Tom Brands; Bert Eussen; Hendrikus J Dubbink; Robert Verdijk; Nicole Naus; Dion Paridaens; Emine Kilic; Annelies de Klein

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):2502. doi:

Anatomy and Pathology/Oncology April 2016

Metastatic Disease in Polyploid Uveal Melanoma Patients Is Associated With BAP1 Mutations

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Serdar Yavuzyigitoglu; Hanneke W. Mensink; Kyra N. Smit; Jolanda Vaarwater; Robert M. Verdijk; Berna Beverloo; Hennie T. Brüggenwirth; Ronald van Marion; Hendrikus J. Dubbink; Dion Paridaens; Nicole C. Naus; Annelies de Klein; Emine Kiliç; for the Rotterdam Ocular Melanoma Study Group (ROMS),
TAGS: bap1 gene, intraocular melanoma, mutation, neoplasm metastasis, neoplasms, polyploidy, ploidies, genes
Invest. Ophthalmol. Vis. Sci.. 2016; 57(4):2232-2239. doi: https://doi.org/10.1167/iovs.15-18608

Includes: Supplemental Content

Anatomy and Pathology/Oncology September 2014

Prevalence and Implications of TERT Promoter Mutation in Uveal and Conjunctival Melanoma and in Benign and Premalignant Conjunctival Melanocytic Lesions

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Anna E. Koopmans; Kimberley Ober; Hendrikus J. Dubbink; Dion Paridaens; Nicole C. Naus; Stephan Belunek; Bart Krist; Edward Post; Ellen C. Zwarthoff; Annelies de Klein; Robert M. Verdijk
TAGS: conjunctiva, eye melanomas, intraocular melanoma, malignant melanoma of conjunctiva, mutation, precancerous conditions, uvea, prevalence, atypical
Invest. Ophthalmol. Vis. Sci.. 2014; 55(9):6024-6030. doi: https://doi.org/10.1167/iovs.14-14901

Anatomy and Pathology/Oncology March 2014

The Prognostic Value of Extraocular Extension in Relation to Monosomy 3 and Gain of Chromosome 8q in Uveal Melanoma

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Jackelien G. M. van Beek; Anna E. Koopmans; Jolanda Vaarwater; Johan J. de Rooi; Dion Paridaens; Nicole C. Naus; Annelies de Klein; Robert M. Verdijk; Emine Kiliç
TAGS: chromosomes, extension, intraocular melanoma, monosomy, neoplasms, neoplasm metastasis, diameter
Invest. Ophthalmol. Vis. Sci.. 2014; 55(3):1284-1291. doi: https://doi.org/10.1167/iovs.13-13670

Anatomy and Pathology/Oncology November 2013

Chemokine Receptor CCR7 Expression Predicts Poor Outcome in Uveal Melanoma and Relates to Liver Metastasis Whereas Expression of CXCR4 Is Not of Clinical Relevance

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Thierry van den Bosch; Anna E. Koopmans; Jolanda Vaarwater; Mike van den Berg; Annelies de Klein; Robert M. Verdijk
TAGS: chemokine receptors, cxcr4 receptors, intraocular melanoma, liver metastases, stromal cell-derived factor 1, neoplasms, neoplasm metastasis
Invest. Ophthalmol. Vis. Sci.. 2013; 54(12):7354-7361. doi: https://doi.org/10.1167/iovs.13-12407

ARVO Annual Meeting Abstract June 2013

BAP1 mutations in uveal melanoma

Anna Koopmans; Robert Verdijk; Thierry van den Bosch; Mike van den Berg; Jolanda Vaarwater; Dion Paridaens; Emine Kilic; Annelies de Klein; Rotterdam Ocular Melanoma Study group (ROMS)

Invest. Ophthalmol. Vis. Sci.. 2013; 54(15):4223. doi:

ARVO Annual Meeting Abstract June 2013

Extraocular extension in uveal melanoma

Jackelien van Beek; Anna Koopmans; Jolanda Vaarwater; Annelies de Klein; Robert Verdijk; Emine Kilic; Rotterdam Ocular Melanoma Study

Invest. Ophthalmol. Vis. Sci.. 2013; 54(15):4245. doi:

Genetics May 2012

Higher Percentage of FISH-Determined Monosomy 3 and 8q Amplification in Uveal Melanoma Cells relate to Poor Patient Prognosis

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Thomas van den Bosch; Jackelien G. M. van Beek; Jolanda Vaarwater; Robert M. Verdijk; Nicole C. Naus; Dion Paridaens; Annelies de Klein; Emine Kiliç
TAGS: amplification, chromosomes, intraocular melanoma, monosomy, neoplasms
Invest. Ophthalmol. Vis. Sci.. 2012; 53(6):2668-2674. doi: https://doi.org/10.1167/iovs.11-8697

ARVO Annual Meeting Abstract April 2011

Absence Of Park2 Mutations In Uveal Melanoma Patients

Thomas van den Bosch; Jolanda Vaarwater; Hanneke Mensink; Emine Kilic; Dion Paridaens; Annelies de Klein

Invest. Ophthalmol. Vis. Sci.. 2011; 52(14):1437. doi:

Anatomy and Pathology/Oncology February 2009

Chromosome 3 Intratumor Heterogeneity in Uveal Melanoma

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Hanneke W. Mensink; Jolanda Vaarwater; Emine Kiliç; Nicole C. Naus; Neeltje Mooy; Gre Luyten; Hennie T. Brüggenwirth; Dion Paridaens; Annelies de Klein
TAGS: chromosomes, human, pair 3, heterogeneity, intraocular melanoma, intratumoral route of administration, monosomy, neoplasms, ulnar-mammary syndrome, body tissue, paraffin
Invest. Ophthalmol. Vis. Sci.. 2009; 50(2):500-504. doi: https://doi.org/10.1167/iovs.08-2279

Biochemistry and Molecular Biology October 2008

Gene Expression Profiling in Uveal Melanoma: Two Regions on 3p Related to Prognosis

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Walter van Gils; Elisabeth M. Lodder; Hanneke W. Mensink; Emine Kiliç; Nicole C. Naus; Hennie T. Brüggenwirth; Wilfred van IJcken; Dion Paridaens; Gregorius P. Luyten; Annelies de Klein
TAGS: chromosomes, gene expression profiling, intraocular melanoma, neoplasms, genes, gene expression, ulnar-mammary syndrome
Invest. Ophthalmol. Vis. Sci.. 2008; 49(10):4254-4262. doi: https://doi.org/10.1167/iovs.08-2033

Includes: Supplemental Content

Anatomy and Pathology/Oncology January 2008

Pyrophosphorolysis Detects B-RAF Mutations in Primary Uveal Melanoma

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Willem Maat; Emine Kilic; Gré P. M. Luyten; Annelies de Klein; Martine J. Jager; Nelleke A. Gruis; Pieter A. Van der Velden
TAGS: intraocular melanoma, mutation, cell lines, neoplasms
Invest. Ophthalmol. Vis. Sci.. 2008; 49(1):23-27. doi: https://doi.org/10.1167/iovs.07-0722

Biochemistry and Molecular Biology November 2007

Expression of APITD1 Is Not Related to Copy Number Changes of Chromosomal Region 1p36 or the Prognosis of Uveal Melanoma

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Walter van Gils; Hanneke W. Mensink; Emine Kilic; Jolanda Vaarwater; Michael M. Verbiest; Dion Paridaens; Gregorius P. Luyten; Annelies de Klein; Hennie T. Brüggenwirth
TAGS: chromosomes, intraocular melanoma, neoplasms, polymerase chain reaction, fluorescent in situ hybridization, cell lines
Invest. Ophthalmol. Vis. Sci.. 2007; 48(11):4919-4923. doi: https://doi.org/10.1167/iovs.07-0061

Anatomy and Pathology/Oncology September 2006

Clinical and Cytogenetic Analyses in Uveal Melanoma

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Emine Kilic; Walter van Gils; Elisabeth Lodder; H. Berna Beverloo; Marjan E. van Til; Cornelia M. Mooy; Dion Paridaens; Annelies de Klein; Gregorius P. M. Luyten
TAGS: cytogenetic analysis, intraocular melanoma, neoplasms, histopathology tests, chromosome abnormality, chromosomes
Invest. Ophthalmol. Vis. Sci.. 2006; 47(9):3703-3707. doi: https://doi.org/10.1167/iovs.06-0101

Includes: Supplemental Content

Anatomy and Pathology/Oncology July 2005

Concurrent Loss of Chromosome Arm 1p and Chromosome 3 Predicts a Decreased Disease-Free Survival in Uveal Melanoma Patients

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Emine Kilic; Nicole C. Naus; Walter van Gils; Caroline C. Klaver; Marjan E. van Til; Michael M. Verbiest; Theo Stijnen; Cornelia M. Mooy; Dion Paridaens; H. Berna Beverloo; Gregorius P. Luyten; Annelies de Klein
TAGS: arm of chromosome, chromosomes, human, pair 3, intraocular melanoma, neoplasms, chromosomes, cytogenetic analysis, fluorescent in situ hybridization, neoplasm metastasis
Invest. Ophthalmol. Vis. Sci.. 2005; 46(7):2253-2257. doi: https://doi.org/10.1167/iovs.04-1460

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Multi-Modality Analysis Improves Survival Prediction in Enucleated Uveal Melanoma Patients

The effect of spliceosome inhibitor E7107 on SF3B1 mut uveal melanoma cell lines

Prognostication of uveal melanoma patients: are exosomes the solution?

Retinal hemangioblastomas in von Hippel-Lindau germline mutation carriers: progression, complications and treatment outcome

Uveal Melanoma Metastatic Rate is Relative to Stochastic Mutation Rate and Type of Mutation

Molecular classification of uveal melanoma subtypes using integrative mutational and whole-genome copy number analysis

Metastatic Disease in Polyploid Uveal Melanoma Patients Is Associated With BAP1 Mutations

Prevalence and Implications of TERT Promoter Mutation in Uveal and Conjunctival Melanoma and in Benign and Premalignant Conjunctival Melanocytic Lesions

The Prognostic Value of Extraocular Extension in Relation to Monosomy 3 and Gain of Chromosome 8q in Uveal Melanoma

Chemokine Receptor CCR7 Expression Predicts Poor Outcome in Uveal Melanoma and Relates to Liver Metastasis Whereas Expression of CXCR4 Is Not of Clinical Relevance

BAP1 mutations in uveal melanoma

Extraocular extension in uveal melanoma

Higher Percentage of FISH-Determined Monosomy 3 and 8q Amplification in Uveal Melanoma Cells relate to Poor Patient Prognosis

Absence Of Park2 Mutations In Uveal Melanoma Patients

Chromosome 3 Intratumor Heterogeneity in Uveal Melanoma

Gene Expression Profiling in Uveal Melanoma: Two Regions on 3p Related to Prognosis

Pyrophosphorolysis Detects B-RAF Mutations in Primary Uveal Melanoma

Expression of APITD1 Is Not Related to Copy Number Changes of Chromosomal Region 1p36 or the Prognosis of Uveal Melanoma

Clinical and Cytogenetic Analyses in Uveal Melanoma

Concurrent Loss of Chromosome Arm 1p and Chromosome 3 Predicts a Decreased Disease-Free Survival in Uveal Melanoma Patients

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