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ARVO Annual Meeting Abstract June 2020

Restoration of vision using selective histone deacetylase 6 inhibitor, Tubastatin A, in models of inherited blindness

Breandan N Kennedy; Sarah Roche; Matthew Brooks; Eugene Dillon; Milton English; Ailis Laura Moran; Anand Swaroop; Husvinee Sundaramurthi

Invest. Ophthalmol. Vis. Sci.. 2020; 61(7):2470. doi:

ARVO Annual Meeting Abstract July 2019

Lamellar Cataract Transcriptome Analyses Suggest Developmental Delay in The Onset of the Differentiation Program in the Ocular Lens

Rajendra K Gangalum; Matthew Brooks; Dongjae Kim; Linn Gieser; Anand Swaroop; Suraj P Bhat

Invest. Ophthalmol. Vis. Sci.. 2019; 60(9):4298. doi:

ARVO Annual Meeting Abstract July 2019

Mitochondria Defects Constitute an Early Step in Retinal Degeneration

Ke Jiang; Anupam Mondal; Yogita Adlakha; Matthew Brooks; Linn Gieser; Jessica Gumerson; Kim Jung-Woong; Raul Covian Garcia; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2019; 60(9):431. doi:

ARVO Annual Meeting Abstract July 2018

Epigenomic reconfiguration during aging of rod photoreceptors

Ximena Corso Diaz; Ryan Rebernick; Catherine Jaeger; Freekje Van Asten; Matthew Brooks; Tiziana Cogliati; Vijender Chaitankar; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2018; 59(9):3490. doi:

ARVO Annual Meeting Abstract July 2018

Three-dimensional retinal organoids from induced pluripotent stem cells derived from rd16 mouse model of CEP290 -LCA

Holly Chen; Koray Dogan Kaya; Coco Ke Jiang; Anupam Mondal; Matthew Brooks; Jung-woong Kim; Manju Swaroop; Wei Zheng; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2018; 59(9):575. doi:

ARVO Annual Meeting Abstract July 2018

Isolated population helps tease out a third locus underlying a multigenic form of canine RPGRIP1 cone-rod dystrophy

Keiko Miyadera; Leonardo Murgiano; Courtney Spector; Felipe Pompeo Marinho; Valerie Dufour; Rueben G Das; Matthew Brooks; Anand Swaroop; Gustavo D Aguirre

Invest. Ophthalmol. Vis. Sci.. 2018; 59(9):1438. doi:

Biochemistry and Molecular Biology September 2017

Regulation of Noncoding Transcriptome in Developing Photoreceptors by Rod Differentiation Factor NRL

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Lina Zelinger; Gökhan Karakülah; Vijender Chaitankar; Jung-Woong Kim; Hyun-Jin Yang; Matthew J. Brooks; Anand Swaroop
TAGS: genes, photoreceptors, regulation, rod photoreceptors, rna, proteins, retinal cone
Invest. Ophthalmol. Vis. Sci.. 2017; 58(11):4422-4435. doi: https://doi.org/10.1167/iovs.17-21805

Includes: Supplemental Content

ARVO Annual Meeting Abstract June 2017

Reference Transcriptome Landscape of Adult Human Retina

Margaret Risa Starostik; Rinki Ratnapriya; Rebecca Kapphahn; Ashley Walton; Alexandra Pietraszkiewicz; Matthew Brooks; Sandra Rocio Montezuma; Lars Fritsche; Goncalo Abecasis; Deborah A Ferrington; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):567. doi:

ARVO Annual Meeting Abstract June 2017

The genetic basis of photoreceptor synaptic terminal structure

Dustin Thad Whitaker; Hannah Fann; Passley Jordan Hargrove; Amal Alsufyani; Matthew Brooks; Soo-Young Kim; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):1026. doi:

ARVO Annual Meeting Abstract June 2017

Transcriptional and DNA methylation changes during aging in rod photoreceptors

Ximena Corso Diaz; Freekje Van Asten; Tiziana Cogliati; Jennifer Joanna Barb; Norimoto Gotoh; Matthew Brooks; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):1844. doi:

ARVO Annual Meeting Abstract June 2017

De-novo assembly of mouse photoreceptor transcriptome identifies un-annotated lncRNAs regulated by NRL

Lina Zelinger; Gökhan Karakülah; Vijender Chaitankar; Jung-Woong Kim; Hyun-Jin Yang; Matthew Brooks; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):2488. doi:

ARVO Annual Meeting Abstract June 2017

Selection of candidate genes implicated in cone survival by photoreceptor transcriptome analysis

Samantha PAPAL; Mackenzie Tennison; Vijender Chaitankar; Hyun-Jin Yang; Matthew Brooks; Jung-Woong Kim; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):4531. doi:

ARVO Annual Meeting Abstract June 2017

Transcriptome analysis of AMD retina reveals convergent molecular pathology

Rinki Ratnapriya; Margaret Risa Starostik; Rebecca Kapphahn; Ashley Walton; Alexandra Pietraszkiewicz; Matthew Brooks; Sandra Rocio Montezuma; Lars Fritsche; Goncalo Abecasis; Deborah A Ferrington; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):4772. doi:

ARVO Annual Meeting Abstract June 2017

A Search for Common Pre-apoptotic Signals/Pathways in Mouse Models of Retinal Degeneration

Coco Ke Jiang; Matthew Brooks; Gökhan Karakülah; Linn Gieser; Jung-Woong Kim; Alexis Boleda; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):267. doi:

ARVO Annual Meeting Abstract June 2017

Genetic influences on the nuclear architecture of photoreceptors

Hannah Fann; Dustin Thad Whitaker; Matthew Brooks; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):343. doi:

ARVO Annual Meeting Abstract September 2016

Identification and Characterisation of Novel Cone Photoreceptor-Enriched Factors Conserved in Zebrafish, Mouse and Human

Andrew Smith; Conor Daly; Ross F Collery; Vijender Chaitankar; Matthew Brooks; Tiziana Cogliati; Anand Swaroop; Breandan N Kennedy

Invest. Ophthalmol. Vis. Sci.. 2016; 57(12):572. doi:

Articles April 2016

Treatment Paradigms for Retinal and Macular Diseases Using 3-D Retina Cultures Derived From Human Reporter Pluripotent Stem Cell Lines

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Rossukon Kaewkhaw; Manju Swaroop; Kohei Homma; Jutaro Nakamura; Matthew Brooks; Koray Dogan Kaya; Vijender Chaitankar; Sam Michael; Gregory Tawa; Jizhong Zou; Mahendra Rao; Wei Zheng; Tiziana Cogliati; Anand Swaroop
TAGS: macular disorders, photoreceptors, retina, stem cells, pluripotent, screening
Invest. Ophthalmol. Vis. Sci.. 2016; 57(5):ORSFl1-ORSFl11. doi: https://doi.org/10.1167/iovs.15-17639

ARVO Annual Meeting Abstract June 2015

Transcriptional regulation of the Müller glia stem cell response to acute light injury

Christopher Sifuentes; Jung-Woong Kim; Hyun-Jin Yang; Matthew Brooks; Anand Swaroop; Pamela Raymond; RC

Invest. Ophthalmol. Vis. Sci.. 2015; 56(7 ):5486. doi:

ARVO Annual Meeting Abstract June 2015

Defining cell classes in the neural retina

Dustin Thad Whitaker; Jung-Woong Kim; Matthew Brooks; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2015; 56(7 ):5491. doi:

ARVO Annual Meeting Abstract June 2015

RetSeq: Next Generation Sequencing Database for Exploring Retinal Development, Aging and Disease.

Koray Dogan Kaya; Matthew Brooks; Hyun-Jin Yang; Jung-Woong Kim; Gokhan Karakulah; Anand Swaroop

Invest. Ophthalmol. Vis. Sci.. 2015; 56(7 ):1240. doi:

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Restoration of vision using selective histone deacetylase 6 inhibitor, Tubastatin A, in models of inherited blindness

Lamellar Cataract Transcriptome Analyses Suggest Developmental Delay in The Onset of the Differentiation Program in the Ocular Lens

Mitochondria Defects Constitute an Early Step in Retinal Degeneration

Epigenomic reconfiguration during aging of rod photoreceptors

Three-dimensional retinal organoids from induced pluripotent stem cells derived from rd16 mouse model of CEP290 -LCA

Isolated population helps tease out a third locus underlying a multigenic form of canine RPGRIP1 cone-rod dystrophy

Regulation of Noncoding Transcriptome in Developing Photoreceptors by Rod Differentiation Factor NRL

Reference Transcriptome Landscape of Adult Human Retina

The genetic basis of photoreceptor synaptic terminal structure

Transcriptional and DNA methylation changes during aging in rod photoreceptors

De-novo assembly of mouse photoreceptor transcriptome identifies un-annotated lncRNAs regulated by NRL

Selection of candidate genes implicated in cone survival by photoreceptor transcriptome analysis

Transcriptome analysis of AMD retina reveals convergent molecular pathology

A Search for Common Pre-apoptotic Signals/Pathways in Mouse Models of Retinal Degeneration

Genetic influences on the nuclear architecture of photoreceptors

Identification and Characterisation of Novel Cone Photoreceptor-Enriched Factors Conserved in Zebrafish, Mouse and Human

Treatment Paradigms for Retinal and Macular Diseases Using 3-D Retina Cultures Derived From Human Reporter Pluripotent Stem Cell Lines

Transcriptional regulation of the Müller glia stem cell response to acute light injury

Defining cell classes in the neural retina

RetSeq: Next Generation Sequencing Database for Exploring Retinal Development, Aging and Disease.

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